exhaust
Hate to say it, but your first problem is the Scorpion Exhaust on the Busa. You will probably need to pick up a power commander and remap for the dual Scorps. I've discovered that Scorpion is by far one of the worst performing exhaust cans for any Suzuki Sport or Sport Tour bike. By far, two of the better that shouldn't need a power commander are M4 and Yoshi. Two Brothers claims you won't need one for theirs, but I don't see how with dual exhaust that you wouldn't need a commander with theirs.
Trust your instincts here, if you pick up the power commander, you will definately get the Scorps to perform like they should. They just need that little kick that a remap will give them. You should gain about 5-8hp from the dual scorps and a remap.